Predictive Analysis of Yi-Gai-San's Multifaceted Mechanisms for Tremor-dominant Parkinson's Disease via Network Pharmacology and Molecular Docking Validation.

IF 3.5 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Chih-Ting Lin, Lung-Yuan Wu, Fan-Shiu Tsai
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引用次数: 0

Abstract

Introduction: Based on comprehensive network-pharmacology and molecular docking analysis, this study was intended to unveil the multiple mechanisms of Yi- Gai-San (YGS) in treating the tremor-dominant subtype of Parkinson's disease (PD-DT). The compounds of YGS were meticulously analyzed, selected, and standardized with references to their pharmacological attributes. Its components included Gouteng (Uncaria rhynchophylla), Chaihu (Radix Bupleuri), Chuanxiong (Chuanxiong Rhizoma), Danggui (Angelicae sinensis radix), Fuling (Wolfiporia extensa), Baizhu (Atractylodis macrocephalae rhizoma), and Gancao (Licorice, Glycyrrhizae radix).

Methods: We identified 75 active compounds within YGS. From these, we predicted 110 gene targets, which exhibited a direct association with PD-DT. PPI network results highlighted core target proteins, including TP53, SLC6A3, GAPDH, MAOB, AKT, BAX, IL6, BCL2, PKA, and CASP3. These proteins potentially alleviate PD-DT by targeting inflammation, modulating neuronal cell apoptosis, and regulating the dopamine system. Furthermore, GO and KEGG enrichment analyses emphasized that YGS might influence various mechanisms, such as the apoptotic process, mitochondrial autophagy, Age-Rage signaling, and dopaminergic and serotonergic synapses. The core proteins from the PPI analysis were selected for the docking experiment.

Results: The docking results demonstrated that the most stable ligand-receptor conformations were kaempferol with CASP3 (-9.5 kcal/mol), stigmasterol with SLC6A3 (-10.5 kcal/mol), shinpterocarpin with BCL2L1 (-9.6 kcal/mol), hirsutine with MAOB (-9.7 kcal/mol), hederagenin with PRKACA (-9.8 kcal/mol), and yatein with GAPDH (-9.8 kcal/mol). These results provide us with research objectives for future endeavors in extracting single compounds for drug manufacturing or in-depth studies on drug mechanisms.

Conclusion: From these computational findings, we suggested that YGS might mitigate PD-DT via "multi-compounds, multi-targets, and multi-pathways."

通过网络药理学和分子对接验证,预测分析易盖三治疗震颤为主型帕金森病的多方面机制。
研究简介本研究基于全面的网络药理学和分子对接分析,旨在揭示 "益盖散 "治疗震颤为主的帕金森病(PDDT)的多种机制。我们对易盖散的成分进行了细致的分析、筛选和标准化,并参考了其药理特性。其成分包括钩藤、柴胡、川芎、当归、茯苓、白术和甘草:我们在 YGS 中发现了 75 种活性化合物,并从中预测了 110 个基因靶点,这些靶点与 PD-DT 有直接关联。PPI 网络结果突出了核心靶蛋白,包括 TP53、SLC6A3、GAPDH、MAOB、AKT、BAX、IL6、BCL2、PKA 和 CASP3。这些蛋白质可能通过靶向炎症、调节神经细胞凋亡和调节多巴胺系统来缓解 PD-DT。此外,GO 和 KEGG 富集分析强调,YGS 可能会影响多种机制,如细胞凋亡过程、线粒体自噬、Age- Rage 信号传导以及多巴胺能和血清素能突触。从 PPI 分析中筛选出核心蛋白进行对接实验:对接结果表明,配体-受体构象最稳定的是山奈酚与 CASP3(-9.5 kcal/mol)、豆甾醇与 SLC6A3(-10.5 kcal/mol)、山柰素与 BCL2L1(-9.6 kcal/mol)、毛蕊花素与 MAOB(-9.7 kcal/mol)、赤芍素与 PRKACA(-9.8 kcal/mol)、山柰素与 GAPDH(-9.8 kcal/mol)。这些结果为我们今后提取单一化合物用于药物生产或深入研究药物机制提供了研究目标:通过这些计算发现,我们认为 YGS 可通过 "多化合物、多靶点和多途径 "缓解 PD-DT。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Current medicinal chemistry
Current medicinal chemistry 医学-生化与分子生物学
CiteScore
8.60
自引率
2.40%
发文量
468
审稿时长
3 months
期刊介绍: Aims & Scope Current Medicinal Chemistry covers all the latest and outstanding developments in medicinal chemistry and rational drug design. Each issue contains a series of timely in-depth reviews and guest edited thematic issues written by leaders in the field covering a range of the current topics in medicinal chemistry. The journal also publishes reviews on recent patents. Current Medicinal Chemistry is an essential journal for every medicinal chemist who wishes to be kept informed and up-to-date with the latest and most important developments.
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