The complete chloroplast genome sequence of Calystegia hederacea Wall. in Roxb. 1824 (Convolvulaceae) in Enshi, Hubei.

IF 0.5 4区生物学 Q4 GENETICS & HEREDITY

Mitochondrial DNA. Part B, Resources Pub Date : 2024-05-22 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2336703

Wei Fu, Lin Li, Lan Long, Xiaolong Wen, Feifei Chen, Shuang Li, Yingchun Zou

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Abstract

Calystegia hederacea Wall. in Roxb. 1824 is a perennial herbaceous vine in the family Convolvulaceae and has several biological effects. Herein, we reported the first complete chloroplast genome of C. hederacea. The chloroplast genome sequence was 152,057 bp in length, comparing a large single-copy (LSC) region of 87,891 bp, a small single-copy (SSC) region of 19,866 bp, and a pair of inverted repeat (IR) regions of 22,150 bp. This sequenced chloroplast genome contained 126 predicted genes, including 81 protein-coding genes, 37 tRNA genes, and eight rRNA genes, and the total GC content of the chloroplast genome was 37.79%. Phylogenetic analysis revealed that C. hederacea was closely related to C. soldanella. The chloroplast genome presented in this study will enrich the genome information of the genus Calystegia and provide deeper insights into the evolution study of the family Convolvulaceae.

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湖北恩施Calystegia hederacea Wall.

Calystegia hederacea Wall. in Roxb. 1824 是旋花科多年生草本藤本植物，具有多种生物效应。在此，我们首次报道了 C. hederacea 的完整叶绿体基因组。叶绿体基因组序列全长 152,057 bp，其中大单拷贝（LSC）区 87,891 bp，小单拷贝（SSC）区 19,866 bp，一对倒位重复（IR）区 22,150 bp。该测序叶绿体基因组包含 126 个预测基因，其中包括 81 个蛋白质编码基因、37 个 tRNA 基因和 8 个 rRNA 基因，叶绿体基因组的总 GC 含量为 37.79%。系统进化分析表明，C. hederacea 与 C. soldanella 关系密切。本研究提供的叶绿体基因组将丰富Calystegia属的基因组信息，为卷柏科的进化研究提供更深入的见解。

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来源期刊

Mitochondrial DNA. Part B, Resources Biochemistry, Genetics and Molecular Biology-Molecular Biology

CiteScore

1.30

自引率

20.00%

发文量

670

期刊介绍： This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.