The complete chloroplast genome sequence of Hydrocotyle vulgaris L. (Araliaceae).

Pub Date : 2024-05-17 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2349333
Xingwu Luo, Wei Fu, Lin Li, Zhanghui Qin, Haiying Wan, Zhexian Zhang, Qiaohui Zhang
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Abstract

Hydrocotyle vulgaris is a perennial wetland clonal plant in the Araliaceae family, which was introduced to China as an ornamental plant in the 1990s. Although H. vulgaris is now considered a potential invasiveness species in China, it also plays a significant role in the remediation of water pollution. Here, we reported its complete chloroplast genome and analyzed the basic characteristics. The chloroplast genome was 153,165 bp in length, including a pair of inverted repeat (IR) regions of 25,072 bp separated by a large single-copy (LSC) region of 84,291 bp and a small single-copy (SSC) region of 18,730 bp. The H. vulgaris chloroplast genome contained 132 predicted genes, and its overall GC content was 37.60%. Phylogenetic analysis revealed that H. vulgaris was closely related to H. verticillata. The H. vulgaris chloroplast genome presented in this study will lay a foundation for further genetic and genomic studies of the genus Hydrocotyle.

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Hydrocotyle vulgaris L.(Araliaceae)的完整叶绿体基因组序列。
绣线菊(Hydrocotyle vulgaris)是一种旱金莲科多年生湿地克隆植物,上世纪 90 年代作为观赏植物引入中国。目前,Hydrocotyle vulgaris 在中国被认为是一种潜在的入侵物种,但它在水污染修复方面也发挥着重要作用。在此,我们报告了其完整的叶绿体基因组,并分析了其基本特征。叶绿体基因组全长153,165 bp,其中包括一对25,072 bp的倒位重复区(IR)和一个84,291 bp的大单拷贝区(LSC)和一个18,730 bp的小单拷贝区(SSC)。H. vulgaris 叶绿体基因组包含 132 个预测基因,总的 GC 含量为 37.60%。系统进化分析表明,H. vulgaris 与 H. verticillata 关系密切。本研究提出的粗叶绣线菊叶绿体基因组将为进一步开展绣线菊属的遗传和基因组研究奠定基础。
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