Design of molecularly imprinted polymers (MIP) using computational methods: A review of strategies and approaches

IF 16.8 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Enayat Mohsenzadeh, Vilma Ratautaite, Ernestas Brazys, Simonas Ramanavicius, Sarunas Zukauskas, Deivis Plausinaitis, Arunas Ramanavicius
{"title":"Design of molecularly imprinted polymers (MIP) using computational methods: A review of strategies and approaches","authors":"Enayat Mohsenzadeh,&nbsp;Vilma Ratautaite,&nbsp;Ernestas Brazys,&nbsp;Simonas Ramanavicius,&nbsp;Sarunas Zukauskas,&nbsp;Deivis Plausinaitis,&nbsp;Arunas Ramanavicius","doi":"10.1002/wcms.1713","DOIUrl":null,"url":null,"abstract":"<p>This paper focuses on the computationally assisted design of molecularly imprinted polymers (MIP), emphasizing the selected strategies and chosen methods of approach. In summary, this paper provides an overview of the MIP fabrication procedure, focusing on key factors and challenges, where the fabrication of MIP includes a step-by-step process with extensive experimental procedures. This brings challenges in optimizing experimental conditions, such as the selection of monomer, cross-linker, and their relevant molar ratios to the template and solvent. Next, the principles of computational methods are elucidated to explore their potential applicability in solving the challenges. The computational approach can tackle the problems and optimize the MIP's design. Finally, the atomistic, quantum mechanical (QM), and combined methods in the recent research studies are overviewed with stress on strategies, analyses, and results. It is demonstrated that optimization of pre-polymerization mixture by employing simulations significantly reduces the trial-and-error experiments. Besides, higher selectivity and sensitivity of MIP are observed. The polymerization and resulting binding sites by computational methods are considered. Several models of binding sites are formed and analyzed to assess the affinities representing the sensitivity and selectivity of modeled cavities. Combined QM/atomistic methods showed more flexibility and versatility for realistic modeling with higher accuracy. This methodological advancement aligns with the principles of green chemistry, offering cost-effective and time-efficient solutions in MIP design.</p><p>This article is categorized under:\n </p>","PeriodicalId":236,"journal":{"name":"Wiley Interdisciplinary Reviews: Computational Molecular Science","volume":null,"pages":null},"PeriodicalIF":16.8000,"publicationDate":"2024-05-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Wiley Interdisciplinary Reviews: Computational Molecular Science","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/wcms.1713","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

Abstract

This paper focuses on the computationally assisted design of molecularly imprinted polymers (MIP), emphasizing the selected strategies and chosen methods of approach. In summary, this paper provides an overview of the MIP fabrication procedure, focusing on key factors and challenges, where the fabrication of MIP includes a step-by-step process with extensive experimental procedures. This brings challenges in optimizing experimental conditions, such as the selection of monomer, cross-linker, and their relevant molar ratios to the template and solvent. Next, the principles of computational methods are elucidated to explore their potential applicability in solving the challenges. The computational approach can tackle the problems and optimize the MIP's design. Finally, the atomistic, quantum mechanical (QM), and combined methods in the recent research studies are overviewed with stress on strategies, analyses, and results. It is demonstrated that optimization of pre-polymerization mixture by employing simulations significantly reduces the trial-and-error experiments. Besides, higher selectivity and sensitivity of MIP are observed. The polymerization and resulting binding sites by computational methods are considered. Several models of binding sites are formed and analyzed to assess the affinities representing the sensitivity and selectivity of modeled cavities. Combined QM/atomistic methods showed more flexibility and versatility for realistic modeling with higher accuracy. This methodological advancement aligns with the principles of green chemistry, offering cost-effective and time-efficient solutions in MIP design.

This article is categorized under:

Abstract Image

Abstract Image

使用计算方法设计分子印迹聚合物 (MIP):策略与方法综述
本文重点介绍分子印迹聚合物(MIP)的计算辅助设计,强调所选策略和方法。总之,本文概述了分子印迹聚合物的制造过程,重点关注关键因素和挑战,其中分子印迹聚合物的制造包括一个具有大量实验程序的逐步过程。这给优化实验条件带来了挑战,例如单体、交联剂及其与模板和溶剂的相关摩尔比的选择。接下来,我们将阐明计算方法的原理,探索其在解决这些难题方面的潜在适用性。计算方法可以解决这些问题并优化 MIP 的设计。最后,概述了近期研究中的原子论、量子力学(QM)和组合方法,并重点介绍了这些方法的策略、分析和结果。结果表明,通过模拟对预聚合混合物进行优化,大大减少了试错实验。此外,还观察到 MIP 具有更高的选择性和灵敏度。通过计算方法考虑了聚合和由此产生的结合位点。建立了多个结合点模型,并对其进行了分析,以评估代表模型空腔灵敏度和选择性的亲和力。综合的质量管理/原子方法显示出更大的灵活性和多功能性,可进行更准确的现实建模。这一方法的进步符合绿色化学的原则,为 MIP 设计提供了具有成本效益和时间效率的解决方案:
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Wiley Interdisciplinary Reviews: Computational Molecular Science
Wiley Interdisciplinary Reviews: Computational Molecular Science CHEMISTRY, MULTIDISCIPLINARY-MATHEMATICAL & COMPUTATIONAL BIOLOGY
CiteScore
28.90
自引率
1.80%
发文量
52
审稿时长
6-12 weeks
期刊介绍: Computational molecular sciences harness the power of rigorous chemical and physical theories, employing computer-based modeling, specialized hardware, software development, algorithm design, and database management to explore and illuminate every facet of molecular sciences. These interdisciplinary approaches form a bridge between chemistry, biology, and materials sciences, establishing connections with adjacent application-driven fields in both chemistry and biology. WIREs Computational Molecular Science stands as a platform to comprehensively review and spotlight research from these dynamic and interconnected fields.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信