Review of predicting protein stability changes upon variations

IF 3.4 4区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Proteomics Pub Date : 2024-04-21 DOI:10.1002/pmic.202300371
Yiling Qiu, Tao Huang, Yu-Dong Cai
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引用次数: 0

Abstract

Forecasting alterations in protein stability caused by variations holds immense importance. Improving the thermal stability of proteins is important for biomedical and industrial applications. This review discusses the latest methods for predicting the effects of mutations on protein stability, databases containing protein mutations and thermodynamic parameters, and experimental techniques for efficiently assessing protein stability in high-throughput settings. Various publicly available databases for protein stability prediction are introduced. Furthermore, state-of-the-art computational approaches for anticipating protein stability changes due to variants are reviewed. Each method's types of features, base algorithm, and prediction results are also detailed. Additionally, some experimental approaches for verifying the prediction results of computational methods are introduced. Finally, the review summarizes the progress and challenges of protein stability prediction and discusses potential models for future research directions.

蛋白质稳定性变化预测回顾
预测变化引起的蛋白质稳定性改变具有极其重要的意义。提高蛋白质的热稳定性对生物医学和工业应用非常重要。本综述讨论了预测突变对蛋白质稳定性影响的最新方法、包含蛋白质突变和热力学参数的数据库,以及在高通量环境下有效评估蛋白质稳定性的实验技术。介绍了各种公开的蛋白质稳定性预测数据库。此外,还综述了预测变异引起的蛋白质稳定性变化的最新计算方法。还详细介绍了每种方法的特征类型、基本算法和预测结果。此外,还介绍了一些验证计算方法预测结果的实验方法。最后,综述总结了蛋白质稳定性预测的进展和挑战,并讨论了未来研究方向的潜在模型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Proteomics
Proteomics 生物-生化研究方法
CiteScore
6.30
自引率
5.90%
发文量
193
审稿时长
3 months
期刊介绍: PROTEOMICS is the premier international source for information on all aspects of applications and technologies, including software, in proteomics and other "omics". The journal includes but is not limited to proteomics, genomics, transcriptomics, metabolomics and lipidomics, and systems biology approaches. Papers describing novel applications of proteomics and integration of multi-omics data and approaches are especially welcome.
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