The MAMP Peptide Patterns of Bacterial Flagellins and Their Interaction with Plant Receptors: Bioinformatic and Coevolutionary Aspects

IF 1.3 4区 生物学 Q4 MICROBIOLOGY
S. Yu. Shchyogolev, G. L. Burygin, Yu. V. Krasova, L. Yu. Matora
{"title":"The MAMP Peptide Patterns of Bacterial Flagellins and Their Interaction with Plant Receptors: Bioinformatic and Coevolutionary Aspects","authors":"S. Yu. Shchyogolev, G. L. Burygin, Yu. V. Krasova, L. Yu. Matora","doi":"10.1134/s0026261723604323","DOIUrl":null,"url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">\n<b>Abstract</b>\n</h3><p>Conserved motifs (peptide patterns) determining the elicitor properties of plant-pathogenic bacteria were identified in the amino acid sequences of the flagellins of phytopathogenic, associative, and root nodule microflora. In plant-growth-promoting rhizobacteria (PGPR), analogs of one (flg22) out of two (flg22 and flgII-28) specific peptides characteristic of pathogens were found. Instead of glycine G18, characteristic of an elicitor, tyrosine Y18 was identified in flg22 analogs of most PGPR, which prevents actuation of the phytoimmunity mechanism against PGPR. Molecular docking with the AlphaFold software package demonstrated significance of the interaction between the plant receptor FLS2 and the canonical peptide flg22 and its analogs from a plant pathogen and an <i>Azospirillum</i> bacterium. However, in the case of the FLS3 plant receptor, only its interactions with the canonical peptide flgII-28 and its analog from the plant pathogen were statistically significant.</p>","PeriodicalId":18514,"journal":{"name":"Microbiology","volume":"100 1","pages":""},"PeriodicalIF":1.3000,"publicationDate":"2024-04-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1134/s0026261723604323","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Conserved motifs (peptide patterns) determining the elicitor properties of plant-pathogenic bacteria were identified in the amino acid sequences of the flagellins of phytopathogenic, associative, and root nodule microflora. In plant-growth-promoting rhizobacteria (PGPR), analogs of one (flg22) out of two (flg22 and flgII-28) specific peptides characteristic of pathogens were found. Instead of glycine G18, characteristic of an elicitor, tyrosine Y18 was identified in flg22 analogs of most PGPR, which prevents actuation of the phytoimmunity mechanism against PGPR. Molecular docking with the AlphaFold software package demonstrated significance of the interaction between the plant receptor FLS2 and the canonical peptide flg22 and its analogs from a plant pathogen and an Azospirillum bacterium. However, in the case of the FLS3 plant receptor, only its interactions with the canonical peptide flgII-28 and its analog from the plant pathogen were statistically significant.

细菌鞭毛蛋白的 MAMP 肽模式及其与植物受体的相互作用:生物信息学与共同进化方面
摘要在植物病原菌、关联微生物和根瘤微生物鞭毛蛋白的氨基酸序列中发现了决定植物病原菌诱导剂特性的保留基序(肽模式)。在植物生长促进根瘤菌(PGPR)中,发现了病原菌特有的两种特定肽(flg22 和 flgII-28)中的一种(flg22)的类似物。在大多数 PGPR 的 flg22 类似物中发现了酪氨酸 Y18,而不是诱导剂所特有的甘氨酸 G18,它能阻止针对 PGPR 的植物免疫机制的启动。使用 AlphaFold 软件包进行的分子对接表明,植物受体 FLS2 与来自植物病原体和氮青霉的典型肽 flg22 及其类似物之间的相互作用非常重要。然而,就 FLS3 植物受体而言,只有它与来自植物病原体的典型肽 flgII-28 及其类似物之间的相互作用具有统计学意义。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Microbiology
Microbiology 生物-微生物学
CiteScore
2.40
自引率
13.30%
发文量
60
审稿时长
6-12 weeks
期刊介绍: Microbiology is an is an international peer reviewed journal that covers a wide range of problems in the areas of fundamental and applied microbiology. The journal publishes experimental and theoretical papers, reviews on modern trends in different fields of microbiological science, and short communications with descriptions of unusual observations. The journal welcomes manuscripts from all countries in the English or Russian language.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信