An updated infrageneric classification of the pantropical species-rich genus Garcinia L. (Clusiaceae) and some insights into the systematics of New Caledonian species, based on molecular and morphological evidence.

IF 1.3 3区 生物学 Q3 PLANT SCIENCES
PhytoKeys Pub Date : 2024-03-15 eCollection Date: 2024-01-01 DOI:10.3897/phytokeys.239.112563
Myriam Gaudeul, Patrick Sweeney, Jérôme Munzinger
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引用次数: 0

Abstract

Garcinia L. is a pantropically distributed genus comprised of at least 250 species of shrubs and trees and has centers of diversity located in Africa/Madagascar, Australasia, and Southeast Asia. The genus is notable due to its extreme diversity of floral form, common presence in lowland tropical rainforests worldwide, and potential pharmacological value. Across its entire geographic range, Garcinia lacks a recent taxonomic revision, with the last genus-level taxonomic treatment of Garcinia conducted over 40 years ago. In order to provide an evolutionary-based framework for a revised infrageneric classification of the genus and to investigate in more detail the systematics of New Caledonian species, we conducted molecular phylogenetic analyses using DNA sequence data for the nuclear ITS region on all samples, and for three chloroplast intergenic spacers (psbM-trnD, trnQ-rps16 and rps16-trnK) on a subset of our overall sampling. Our phylogenetic analyses are the most comprehensive to date for the genus, containing 111 biogeographically and morphologically diverse Garcinia species. The analyses support a broad circumscription of Garcinia, including several previously segregated genera (e.g. Allanblackia, Clusianthemum, Ochrocarpos p.p., Pentaphalangium, Rheedia, and Tripetalum). We recovered nine major clades falling within two major lineages, and we delimit 11 sections. We discuss each of the clades, assign them sectional names, discuss their distinguishing morphological features, compare our taxonomic treatment with the most recent sectional treatment, list representative species, note geographic distribution, and highlight some questions that deserve future investigations. We propose nine new nomenclatural combinations, four new names, and three new lectotypes. In New Caledonia (NC), a total of ten, all endemic, species are recognized and were included in our phylogenetic analyses, with several replicates per species (with the exception of G.virgata and G.urceolata, represented by a single accession each). New Caledonian species were retrieved within three separate clades, respectively including 1) G.balansae; 2) G.comptonii, G.neglecta, G.urceolata, G.virgata; and 3) G.amplexicaulis, G.densiflora, G.pedicellata, G.puat, G.vieillardii. Within NC, the phylogenies did not support the distinction between a putative undescribed species and G.balansae. However, it confirmed the distinction between NC species and both G.vitiensis (found in Fiji and Vanuatu) and G.adinantha (found in Fiji), suggesting that all NC species should be considered as endemics.

基于分子和形态学证据,更新泛热带物种丰富的藤黄属(Clusiaceae)的下属分类,以及对新喀里多尼亚物种系统学的一些见解。
藤黄属(Garcinia L.)是一个泛热带分布的属,由至少 250 种灌木和乔木组成,其多样性中心位于非洲/马达加斯加、大洋洲和东南亚。该属植物的显著特点是花形极其多样,普遍存在于世界各地的低地热带雨林中,并具有潜在的药用价值。在其整个地理分布范围内,藤黄属缺乏最新的分类学修订,上一次对藤黄属进行属级分类学处理是在 40 多年前。为了为修订该属的下属分类提供一个基于进化的框架,并更详细地研究新喀里多尼亚物种的系统学,我们利用所有样本的核ITS区DNA序列数据,以及总体样本中一部分样本的三个叶绿体基因间间隔区(psbM-trnD、trnQ-rps16和rps16-trnK)的DNA序列数据,进行了分子系统学分析。我们的系统发育分析是迄今为止对该属进行的最全面的分析,其中包含 111 个生物地理学和形态学上不同的藤黄属物种。分析结果支持对加西尼亚属进行广泛的划分,其中包括几个以前分离的属(如 Allanblackia、Clusianthemum、Ochrocarpos p.p.、Pentaphalangium、Rheedia 和 Tripetalum)。我们发现了两个主要世系中的九个主要支系,并划分了 11 个部分。我们讨论了每个支系,为它们分配了科名,讨论了它们的显著形态特征,比较了我们的分类学处理与最新的科名处理,列出了代表性物种,指出了地理分布,并强调了一些值得未来研究的问题。我们提出了 9 个新的命名组合、4 个新名称和 3 个新的模式标本。在新喀里多尼亚(NC),共有 10 个物种被确认为特有种,并被纳入我们的系统发育分析中,每个物种都有多个重复序列(G.virgata 和 G.urceolata 除外,每种只有一个重复序列)。新喀里多尼亚物种在三个独立支系中被检索到,分别包括:1)G.balansae;2)G.comptonii、G.negliga、G.urceolata、G.virgata;以及 3)G.ampxicaulis、G.densiflora、G.pedicellata、G.puat、G.vieillardii。在北卡罗来纳州内,系统发生不支持将一个推定的未描述物种与 G.balansae 区分开来。然而,系统发育证实了北卡罗来纳种与 G.vitiensis(发现于斐济和瓦努阿图)和 G.adinantha(发现于斐济)之间的区别,这表明所有北卡罗来纳种都应被视为特有种。
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来源期刊
PhytoKeys
PhytoKeys PLANT SCIENCES-
CiteScore
2.60
自引率
14.30%
发文量
189
审稿时长
6 weeks
期刊介绍: PhytoKeys is a peer-reviewed, open-access, online and print, rapidly produced journal launched to support free exchange of ideas and information in systematic botany. All papers published in PhytoKeys can be freely copied, downloaded, printed and distributed at no charge for the reader. Authors are thus encouraged to post the pdf files of published papers on their homepages or elsewhere to expedite distribution. There is no charge for color.
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