Evaluation of novel open-source software for cardiac optical mapping

Olivia Baines , Rina Sha , Siddhanth Jatti, Christopher O'Shea
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Abstract

KairoSight-3.0 is a recently released Python-based, open-source software for cardiac optical mapping analysis. Addressing challenges in high-resolution electrophysiological data analysis, KairoSight-3.0 facilitates comprehensive studies of cardiac conduction and excitation-contraction coupling. We compared its performance with ElectroMap, focusing on action potential duration and conduction velocity measurements in mouse heart models subjected to ischaemia and flecainide treatment. Our findings reveal that while both software are effective, inherent methodological differences impact measurement outcomes. KairoSight-3.0's robust analysis capabilities make it a valuable tool in cardiac research. Additionally, future directions for KairoSight-3.0 and other mapping analysis tools are explored.

Statement of importance

Open-source methods for analysis of cardiac optical mapping are vital tools in electrophysiological research. Our work directly evaluates the latest version of KarioSight, recently published in JMCC plus, with ElectroMap, an established and widely used tool. Our results show both software are effective in analysis of changes in both conduction and repolarisation. Considering the new features of KairoSight-3.0 and python implementation, our study importantly demonstrates the effectiveness of the software, highlights potential discrepancies between it and ElectroMap, and provides a perspective on future directions for KairoSight-3.0 and other software.

评估用于心脏光学绘图的新型开源软件
KairoSight-3.0 是最近发布的一款基于 Python 的心脏光学图谱分析开源软件。为应对高分辨率电生理数据分析方面的挑战,KairoSight-3.0 为心脏传导和兴奋-收缩耦合的综合研究提供了便利。我们将其性能与 ElectroMap 进行了比较,重点是测量缺血和非加尼治疗后小鼠心脏模型的动作电位持续时间和传导速度。我们的研究结果表明,虽然两种软件都很有效,但内在的方法差异会影响测量结果。KairoSight-3.0 强大的分析能力使其成为心脏研究的重要工具。此外,我们还探讨了 KairoSight-3.0 和其他绘图分析工具的未来发展方向。 重要声明用于分析心脏光学绘图的开源方法是电生理研究的重要工具。我们的工作直接评估了最近发表在《JMCC plus》上的最新版 KarioSight 与 ElectroMap(一种成熟且广泛使用的工具)。结果表明,这两款软件都能有效分析传导和复极化的变化。考虑到 KairoSight-3.0 的新功能和 python 实现,我们的研究有力地证明了该软件的有效性,突出了它与 ElectroMap 之间的潜在差异,并为 KairoSight-3.0 和其他软件的未来发展方向提供了一个视角。
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来源期刊
Journal of molecular and cellular cardiology plus
Journal of molecular and cellular cardiology plus Cardiology and Cardiovascular Medicine
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