Establishment of RPA-Cas12a-Based Fluorescence Assay for Rapid Detection of Feline Parvovirus.

Polish journal of microbiology Pub Date : 2024-03-04 eCollection Date: 2024-03-01 DOI:10.33073/pjm-2024-005
Ting Wang, Hao Zeng, Qiming Liu, Weidong Qian, Yongdong Li, Jian Liu, Rong Xu
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Abstract

Feline parvovirus (FPV) is highly infectious for cats and other Felidae and often causes severe damage to young kittens. In this study, we incorporated recombinase polymerase amplification (RPA) and Cas12a-mediated detection and developed an RPA-Cas12a-based real-time or end-point fluorescence detection method to identify the NS1 gene of FPV. The total time of RPA-Cas12a-based fluorescence assay is approximately 25 min. The assay presented a limit of detection (LOD) of 1 copies/μl (25 copies/per reaction), with no cross-reactivity with several feline pathogens. The clinical performance of the assay was examined using total genomic DNA purified from 60 clinical specimens and then compared to results obtained with qPCR detection of FPV with 93.3% positive predictive agreement and 100% negative predictive agreement. Together, the rapid reaction, cost-effectiveness, and high sensitivity make the RPA-Cas12a-based fluorescence assay a fascinating diagnostic tool that will help minimize infection spread through instant detection of FPV.

建立基于 RPA-Cas12a 的荧光检测方法,用于快速检测猫细小病毒。
猫细小病毒(FPV)对猫和其他猫科动物具有高度传染性,经常对幼猫造成严重伤害。本研究结合重组酶聚合酶扩增(RPA)和Cas12a介导的检测方法,开发了一种基于RPA-Cas12a的实时或终点荧光检测方法来鉴定FPV的NS1基因。基于 RPA-Cas12a 的荧光检测总时间约为 25 分钟。该检测方法的检测限(LOD)为1拷贝/μl(25拷贝/次反应),与多种猫科病原体无交叉反应。使用从 60 份临床标本中纯化的总基因组 DNA 检验了该检测方法的临床性能,并将其与 qPCR 检测 FPV 的结果进行了比较,两者的阳性预测一致率为 93.3%,阴性预测一致率为 100%。基于 RPA-Cas12a 的荧光检测具有反应迅速、成本效益高和灵敏度高等特点,是一种极具吸引力的诊断工具,有助于通过即时检测 FPV 最大限度地减少感染传播。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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