Fluctibacter corallii gen. nov., sp. nov., isolated from the coral Montipora capitata on a reef in Kāne'ohe Bay, O'ahu, Hawai'i, reclassification of Aestuariibacter halophilus as Fluctibacter halophilus comb. nov., and Paraglaciecola oceanifecundans as a later heterotypic synonym of Paraglaciecola agarilytica.

IF 1.8 3区 生物学 Q4 MICROBIOLOGY
Sarah A Emsley, Rachel M Loughran, Maximillian D Shlafstein, Kaysa M Pfannmuller, Yesmarie T De La Flor, Charles G Lein, Nicholas C Dove, Marc J Koyack, David K Oline, Thomas E Hanson, Patrick Videau, Jimmy H Saw, Blake Ushijima
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Abstract

Strain AA17T was isolated from an apparently healthy fragment of Montipora capitata coral from the reef surrounding Moku o Lo'e in Kāne'ohe Bay, O'ahu, Hawai'i, USA, and was taxonomically evaluated using a polyphasic approach. Comparison of a partial 16S rRNA gene sequence found that strain AA17T shared the greatest similarity with Aestuariibacter halophilus JC2043T (96.6%), and phylogenies based on 16S rRNA gene sequences grouped strain AA17T with members of the Aliiglaciecola, Aestuariibacter, Lacimicrobium, Marisediminitalea, Planctobacterium, and Saliniradius genera. To more precisely infer the taxonomy of strain AA17T, a phylogenomic analysis was conducted and indicated that strain AA17T formed a monophyletic clade with A. halophilus JC2043T, divergent from Aestuariibacter salexigens JC2042T and other related genera. As a result of monophyly and multiple genomic metrics of genus demarcation, strain AA17T and A. halophilus JC2043T comprise a distinct genus for which the name Fluctibacter gen. nov. is proposed. Based on a polyphasic characterisation and identifying differences in genomic and taxonomic data, strain AA17T represents a novel species, for which the name Fluctibacter corallii sp. nov. is proposed. The type strain is AA17T (= LMG 32603 T = NCTC 14664T). This work also supports the reclassification of A. halophilus as Fluctibacter halophilus comb. nov., which is the type species of the Fluctibacter genus. Genomic analyses also support the reclassification of Paraglaciecola oceanifecundans as a later heterotypic synonym of Paraglaciecola agarilytica.

Abstract Image

从夏威夷瓦胡岛卡内奥赫湾的珊瑚礁上分离出的新种珊瑚波动杆菌(Fluctibacter corallii gen.nov.,sp.nov.),将嗜卤水杆菌(Aestuariibacter halophilus)重新归类为嗜卤水波动杆菌新种(Fluctibacter halophilus comb.nov.),并将Paraglaciecola oceanifecundans作为Paraglaciecola agarilytica的异型异名。
菌株 AA17T 分离自美国夏威夷瓦胡岛卡内奥赫湾 Moku o Lo'e 周围珊瑚礁中明显健康的 Montipora capitata 珊瑚片段,并采用多相法对其进行了分类评估。对部分 16S rRNA 基因序列进行比较后发现,菌株 AA17T 与嗜卤醋栗杆菌 JC2043T 的相似度最高(96.6%),基于 16S rRNA 基因序列的系统发育将菌株 AA17T 与 Aliiglaciecola、醋栗杆菌、Lacimicrobium、Marisediminitalea、Planctobacterium 和 Saliniradius 属的成员归为一类。为了更准确地推断菌株 AA17T 的分类,我们对其进行了系统发生组分析,结果表明菌株 AA17T 与嗜卤杆菌 JC2043T 构成一个单系支系,与 Aestuariibacter salexigens JC2042T 及其他相关属不同。由于单系和多个基因组指标的属划分,菌株 AA17T 和 A. halophilus JC2043T 组成了一个独特的属,并被命名为 Fluctibacter gen.根据多相特征分析以及基因组和分类学数据的差异,菌株 AA17T 代表了一个新种,其名称为 Fluctibacter corallii sp.模式菌株为 AA17T(= LMG 32603 T = NCTC 14664T)。这项工作还支持将 A. halophilus 重新分类为 Fluctibacter halophilus comb.基因组分析还支持将 Paraglaciecola oceanifecundans 重新分类为 Paraglaciecola agarilytica 的异型异名。
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来源期刊
CiteScore
5.60
自引率
11.50%
发文量
104
审稿时长
3 months
期刊介绍: Antonie van Leeuwenhoek publishes papers on fundamental and applied aspects of microbiology. Topics of particular interest include: taxonomy, structure & development; biochemistry & molecular biology; physiology & metabolic studies; genetics; ecological studies; especially molecular ecology; marine microbiology; medical microbiology; molecular biological aspects of microbial pathogenesis and bioinformatics.
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