An improved genetic marker panel for conservation monitoring of upper Kootenay River burbot

IF 0.9 4区环境科学与生态学 Q4 BIODIVERSITY CONSERVATION

Conservation Genetics Resources Pub Date : 2024-02-14 DOI:10.1007/s12686-024-01351-9

Audrey C. Harris, D. Katharine Coykendall, Heather Lamson, Ryan P. Kovach, James L. Dunnigan, Matthew R. Campbell

引用次数: 0

Abstract

Burbot populations in the Upper Kootenay watershed, transecting the US-Canada border, are subject to intense monitoring and management after severe declines beginning in the 1970s. Genetic monitoring is a high-priority goal for the East Kootenay Burbot Scientific Working Group, but managers do not currently have a genetic marker panel with enough resolution to understand genetic population structure and family structure in the Upper Kootenay burbot populations. Here, we detail the process of developing and optimizing a cost-effective GTseq panel to aid in the conservation of Upper Kootenay burbot. The final GTseq panel contains 331 markers with sufficient variation to accurately infer population structure and reconstruct pedigrees.

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用于监测库特奈河上游水豚保护情况的改良遗传标记组

上库特内流域横跨美国和加拿大边境，该流域的伯博特种群数量自 20 世纪 70 年代开始严重下降，目前正受到严密的监测和管理。遗传监测是东库特尼大黄颡鱼科学工作组的一个优先目标，但管理人员目前还没有一个分辨率足够高的遗传标记小组来了解上库特尼大黄颡鱼种群的遗传种群结构和家族结构。在此，我们将详细介绍开发和优化具有成本效益的 GTseq 面板的过程，以帮助保护上库特尼大黄鸭。最终的 GTseq 面板包含 331 个标记，其变异足以准确推断种群结构并重建血统。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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来源期刊

Conservation Genetics Resources BIODIVERSITY CONSERVATION-GENETICS & HEREDITY

CiteScore

2.90

自引率

9.10%

发文量

审稿时长

3-6 weeks

期刊介绍： Conservation Genetics Resources promotes the conservation of genetic diversity and advances the study of conservation genetics by providing rapid publication of technical papers and reviews on methodological innovations or improvements, computer programs, and genomic resources, as well as on the practical application of these resources towards the development of effective conservation policy and practice.