AI breeder: Genomic predictions for crop breeding

Wanjie Feng , Pengfei Gao , Xutong Wang
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Abstract

The integration of Artificial Intelligence (AI) into crop breeding represents a paradigm shift toward data-driven agricultural practices, aiming to enhance the efficiency and precision of crop improvement. In this perspective, we critically evaluate the impact of genomic prediction models like SoyDNGP (Soybean Deep Neural Genomic Prediction) on crop breeding. We discuss their current applications, challenges, and future potential. Addressing existing obstacles such as optimizing parent selection, accurately predicting the combined effects of multiple traits and genes, advancing explainable deep learning, and incorporating environmental factors, we propose practical approaches to overcome these challenges. Our insights aim to unlock the full potential of AI in genomic prediction, contributing to a comprehensive understanding of AI’s role in agriculture. We advocate for future research efforts that harness AI to cultivate sustainable and equitable food systems.

人工智能育种专家:作物育种的基因组预测
人工智能(AI)与作物育种的结合代表了向数据驱动型农业实践的范式转变,旨在提高作物改良的效率和精度。在这一视角下,我们严格评估了 SoyDNGP(大豆深度神经基因组预测)等基因组预测模型对作物育种的影响。我们讨论了这些模型的当前应用、挑战和未来潜力。针对现有的障碍,如优化亲本选择、准确预测多个性状和基因的综合效应、推进可解释的深度学习以及结合环境因素,我们提出了克服这些挑战的实用方法。我们的见解旨在释放人工智能在基因组预测方面的全部潜力,为全面了解人工智能在农业中的作用做出贡献。我们倡导未来的研究工作利用人工智能来培育可持续和公平的粮食系统。
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