Visualizing species richness and site similarity from presence-absence matrices

Jorge Soberón, M. Cobos, C. Nuñez-Penichet
{"title":"Visualizing species richness and site similarity from presence-absence matrices","authors":"Jorge Soberón, M. Cobos, C. Nuñez-Penichet","doi":"10.17161/bi.v16i1.14782","DOIUrl":null,"url":null,"abstract":"Species richness and similarity of biotas among distinct sites are important quantities in biogeography. Indices derived from presence-absence matrices are used to represent these quantities in so-called diversity-range plots.  The most commonly used diversity-range plot, however, has multiple special cases and its interpretation is cumbersome. Here we present an equivalent formulation that is geometrically simpler and has no special cases. In addition, we introduce a method to identify the statistical significance of the dispersion field, an index that represents how similar species composition is in a cell with respect to the whole area. The new diversity-range plot is a promising tool to explore biodiversity and endemism in a region as the values shown in this plot and whether they are statistically significant or not can also be represented in geography.","PeriodicalId":269455,"journal":{"name":"Biodiversity Informatics","volume":"205 1 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biodiversity Informatics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.17161/bi.v16i1.14782","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2

Abstract

Species richness and similarity of biotas among distinct sites are important quantities in biogeography. Indices derived from presence-absence matrices are used to represent these quantities in so-called diversity-range plots.  The most commonly used diversity-range plot, however, has multiple special cases and its interpretation is cumbersome. Here we present an equivalent formulation that is geometrically simpler and has no special cases. In addition, we introduce a method to identify the statistical significance of the dispersion field, an index that represents how similar species composition is in a cell with respect to the whole area. The new diversity-range plot is a promising tool to explore biodiversity and endemism in a region as the values shown in this plot and whether they are statistically significant or not can also be represented in geography.
利用存在-缺失矩阵可视化物种丰富度和站点相似性
物种丰富度和不同地点间生物区系的相似性是生物地理学的重要指标。在所谓的多样性范围图中,由存在-不存在矩阵导出的指数用来表示这些数量。然而,最常用的多样性范围图有多种特殊情况,其解释也很繁琐。在这里,我们提出一个等价的公式,它在几何上更简单,没有特殊情况。此外,我们还介绍了一种方法来识别弥散场的统计显著性,这是一个表示细胞中物种组成相对于整个区域的相似程度的指数。新的多样性范围图是一种很有前途的工具,可以用来探索一个地区的生物多样性和地方性,因为该图中显示的值以及它们是否具有统计显著性也可以在地理上表示。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信