{"title":"Retinal Disease Classification from OCT Images Using Deep Learning Algorithms","authors":"Jongwoo Kim, L. Tran","doi":"10.1109/CIBCB49929.2021.9562919","DOIUrl":null,"url":null,"abstract":"Optical Coherence Tomography (OCT) is a noninvasive test that takes cross-section pictures of the retina layer of the eye and allows ophthalmologists to diagnose based on the retina's layers. Therefore, it is an important modality for the detection and quantification of retinal diseases and retinal abnormalities. Since OCT provides several images for each patient, it is a time consuming work for ophthalmologists to analyze the images. This paper proposes deep learning models that categorize patients' OCT images into four categories such as Choroidal neovascularization (CNV), Diabetic macular edema (DME), Drusen, and Normal. Two different models are proposed. One is using three binary Convolutional Neural Network (CNN) classifiers and the other is using four binary CNN classifiers. Several CNNs, such as VGG16, VGG19, ResNet50, ResNet152, DenseNet121, and InceptionV3, are adapted as feature extractors to develop the binary classifiers. Among them, the proposed model using VGG16 for CNV vs. Other classes, VGG16 for DME vs. other classes, VGG19 for Drusen vs. Other classes, and InceptionV3 for Normal vs. other classes shows the best performance with 0.987 accuracy, 0.987 sensitivity, and 0.996 specificity. The binary classifier for Normal class has 0.999 accuracy. These results show their potential to work as a second reader for ophthalmologists.","PeriodicalId":163387,"journal":{"name":"2021 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)","volume":"27 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2021-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"8","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2021 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/CIBCB49929.2021.9562919","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 8
Abstract
Optical Coherence Tomography (OCT) is a noninvasive test that takes cross-section pictures of the retina layer of the eye and allows ophthalmologists to diagnose based on the retina's layers. Therefore, it is an important modality for the detection and quantification of retinal diseases and retinal abnormalities. Since OCT provides several images for each patient, it is a time consuming work for ophthalmologists to analyze the images. This paper proposes deep learning models that categorize patients' OCT images into four categories such as Choroidal neovascularization (CNV), Diabetic macular edema (DME), Drusen, and Normal. Two different models are proposed. One is using three binary Convolutional Neural Network (CNN) classifiers and the other is using four binary CNN classifiers. Several CNNs, such as VGG16, VGG19, ResNet50, ResNet152, DenseNet121, and InceptionV3, are adapted as feature extractors to develop the binary classifiers. Among them, the proposed model using VGG16 for CNV vs. Other classes, VGG16 for DME vs. other classes, VGG19 for Drusen vs. Other classes, and InceptionV3 for Normal vs. other classes shows the best performance with 0.987 accuracy, 0.987 sensitivity, and 0.996 specificity. The binary classifier for Normal class has 0.999 accuracy. These results show their potential to work as a second reader for ophthalmologists.
光学相干断层扫描(OCT)是一种非侵入性检查,它可以拍摄眼睛视网膜层的横截面照片,并允许眼科医生根据视网膜层进行诊断。因此,它是检测和定量视网膜疾病和视网膜异常的重要方式。由于OCT为每位患者提供多张图像,因此眼科医生分析图像是一项耗时的工作。本文提出了深度学习模型,将患者的OCT图像分为脉络膜新生血管(CNV)、糖尿病性黄斑水肿(DME)、Drusen和正常四类。提出了两种不同的模型。一种是使用三个二进制卷积神经网络(CNN)分类器,另一种是使用四个二进制CNN分类器。采用VGG16、VGG19、ResNet50、ResNet152、DenseNet121、InceptionV3等几种cnn作为特征提取器开发二值分类器。其中,采用VGG16对CNV vs. Other类、VGG16对DME vs. Other类、VGG19对Drusen vs. Other类、InceptionV3对Normal vs. Other类的模型,准确率0.987、灵敏度0.987、特异性0.996,表现最佳。对于Normal类,二元分类器的准确率为0.999。这些结果显示了它们作为眼科医生的第二阅读器的潜力。