Bashir Ismail Olawale, Ayokunu Akinyemi Odewumi, Sanusi Magaji, H. Tahir
{"title":"A Three-Tube Scheme for Same-Day Presumptive Identification of Klebsiella pneumoniae in Clinical Specimens","authors":"Bashir Ismail Olawale, Ayokunu Akinyemi Odewumi, Sanusi Magaji, H. Tahir","doi":"10.56919/usci.1122.006","DOIUrl":null,"url":null,"abstract":"A three-tube scheme that comprised a urease tube, motility tube and a gluconate-nitrate composite medium tube was evaluated for its reliability in correctly predicting the identity of Klebsiella pneumoniae after six hours of incubation. A total of 33 strains were used to assess the scheme, of which 17 were laboratory stock cultures, 14 were fresh clinical isolates, and two were environmental isolates from soil samples. The three tubes were heavily inoculated to give a density approximating McFarland No. 7 turbidity standard, which is roughly equivalent to a bacterial suspension with a concentration of 21 x 108 organisms/ml. The three-tube scheme identified all the five strains of Klebsiella pneumoniae tested correctly, but it was only able to accurately identify 23 out of 28 strains that were not Klebsiella pneumoniae. The scheme falsely identified five test strains that were not Klebsiella pneumoniae. The scheme had a sensitivity of 100 %, a specificity of 82.1 %, a positive predictive value of 50 % and a negative predictive value of 100 %. The scheme should perform better if the distinctive colonial characteristics of isolates on MacConkey agar were considered when predicting making prediction about identity, and a stricter interpretation of the results provided by the scheme was adopted.","PeriodicalId":235595,"journal":{"name":"UMYU Scientifica","volume":"41 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2022-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"UMYU Scientifica","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.56919/usci.1122.006","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
A three-tube scheme that comprised a urease tube, motility tube and a gluconate-nitrate composite medium tube was evaluated for its reliability in correctly predicting the identity of Klebsiella pneumoniae after six hours of incubation. A total of 33 strains were used to assess the scheme, of which 17 were laboratory stock cultures, 14 were fresh clinical isolates, and two were environmental isolates from soil samples. The three tubes were heavily inoculated to give a density approximating McFarland No. 7 turbidity standard, which is roughly equivalent to a bacterial suspension with a concentration of 21 x 108 organisms/ml. The three-tube scheme identified all the five strains of Klebsiella pneumoniae tested correctly, but it was only able to accurately identify 23 out of 28 strains that were not Klebsiella pneumoniae. The scheme falsely identified five test strains that were not Klebsiella pneumoniae. The scheme had a sensitivity of 100 %, a specificity of 82.1 %, a positive predictive value of 50 % and a negative predictive value of 100 %. The scheme should perform better if the distinctive colonial characteristics of isolates on MacConkey agar were considered when predicting making prediction about identity, and a stricter interpretation of the results provided by the scheme was adopted.
评估了由脲酶管、动力管和葡萄糖-硝酸盐复合培养基管组成的三管方案在6小时孵育后正确预测肺炎克雷伯菌身份的可靠性。共有33株菌株用于评估方案,其中17株为实验室家畜培养株,14株为新鲜临床分离株,2株为土壤样品环境分离株。这三根试管大量接种,以获得接近麦克法兰7号浊度标准的密度,这大致相当于浓度为21 x 108个生物体/ml的细菌悬浮液。三管方案正确地鉴定了所有5株肺炎克雷伯菌,但是它只能准确地鉴定出28株非肺炎克雷伯菌中的23株。该方案错误地鉴定了五种不是肺炎克雷伯菌的测试菌株。该方案的敏感性为100%,特异性为82.1%,阳性预测值为50%,阴性预测值为100%。如果在进行鉴定预测时考虑到MacConkey琼脂上分离菌的独特群体特征,并采用更严格的解释方案所提供的结果,则该方案应具有更好的效果。