Identifying Extreme Behaviour and Fitting Empirical Models for Dengue Incidents of Selected Regions in Sri Lanka

S. Nisansala, P. Wijekoon
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Abstract

: Dengue fever is one of the most significant mosquito-borne diseases caused by a virus. Numerous methods available to predict dengue incidents are mainly focused on the mean features of events. However, understanding the extreme behaviour of dengue incidents is important, and that will allow sufficient time to take the necessary decisions and actions to safeguard the situation for local authorities. Therefore, this study mainly focuses to model the risk of rare dengue events, that is, extreme dengue events, and to identify the best-fitted distributions for the study areas. Further, the weather-based dengue empirical models for dengue incidents were fitted using climatological factors to forecast potential outbreaks. The weekly dengue incidents and climatology data (rainfall, temperature, and relative humidity) from January 2010 to December 2018 for seven administrative districts were collected from the Epidemiology Unit of the Ministry of Health (MoH), and the Meteorology Department of Sri Lanka, respectively. The Extreme value theory (EVT) was used to analyse the extreme dengue incidents, and the negative binomial generalized linear model was used to fit weather-based dengue empirical models. Various lag times between dengue and weather variables were analysed to identify the optimal dengue forecasting period. The best fitted empirical models for dengue incidents were identified for the selected districts. The Generalized Linear Negative Binomial (GLNB) models with monsoon season as a covariate, lag 0 model is the suitable model for Colombo and Gampaha districts, and lag 1 model is the suitable for Kurunegala whereas lag 2 model is the best for Anuradhapura with highest prediction accuracy. For Badulla district, lag 2 model without having monsoon season as a covariate shows highest prediction accuracy. The prediction accuracy is the same for the models with or without having the monsoon season as a covariate for Kandy (lag 2) and Ratnapura (lag 3) districts.
确定斯里兰卡选定地区登革热事件的极端行为和拟合经验模型
登革热是由病毒引起的最严重的蚊媒疾病之一。用于预测登革热事件的许多方法主要集中在事件的平均特征上。然而,了解登革热事件的极端行为是很重要的,这将使地方当局有足够的时间采取必要的决定和行动,以保护局势。因此,本研究的重点是建立罕见登革热事件,即极端登革热事件的风险模型,并确定研究区域的最佳拟合分布。此外,利用气候因子拟合基于天气的登革热事件经验模型来预测潜在的疫情。分别从斯里兰卡卫生部流行病学股和气象局收集了2010年1月至2018年12月7个行政区的每周登革热病例和气候数据(降雨量、温度和相对湿度)。采用极值理论(EVT)分析登革热极端事件,采用负二项广义线性模型拟合基于天气的登革热经验模型。分析登革热与天气变量之间的各种滞后时间,以确定登革热的最佳预测期。为选定的地区确定了最适合登革热事件的经验模型。以季风季节为协变量的广义线性负二项(GLNB)模型,在科伦坡和Gampaha地区最适合使用lag 0模型,在Kurunegala地区最适合使用lag 1模型,而在Anuradhapura地区最适合使用lag 2模型,预测精度最高。在巴杜拉地区,不含季风季节协变量的滞后2模型预测精度最高。对于Kandy(滞后2)和Ratnapura(滞后3)地区,无论是否将季风季节作为协变量,模型的预测精度是相同的。
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