Synergistic Effect of Distal Polar Interactions in Myoglobin and Their Structural Consequences

IF 4.3 2区 化学 Q1 CHEMISTRY, INORGANIC & NUCLEAR
Miho Watanabe, Yuki Kanai, Shunpei Nakamura, Ryu Nishimura, Tomokazu Shibata, Atsuya Momotake, Sachiko Yanagisawa, Takashi Ogura, Takashi Matsuo, Shun Hirota, Saburo Neya, Akihiro Suzuki, Yasuhiko Yamamoto*
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引用次数: 3

Abstract

In the L29F variant of myoglobin (Mb), the coordination of oxygen (O2) to the heme Fe atom is stabilized by favorable electrostatic interactions between the polar Fe–O2 moiety and the multipole of the phenyl ring of the Phe29 side chain (Phe29 interaction), in addition to the well-known hydrogen bond (H-bond) between the Fe-bound O2 and the 64th residue (distal H-bond; Carver, T. E.; Brantley, R. E., Jr.; Singleton, E. W.; Arduini, R. M.; Quillin, M. L.; Phillips, G. N., Jr.; Olson, J. S. J. Biol. Chem.1992, 267, 14443–14450). The O2 and carbon monoxide (CO) binding properties and autoxidation of the L29F/H64L and L29F/H64Q variants reconstituted with a series of chemically modified heme cofactors were analyzed and then compared with those of native Mb, and the L29F, H64Q, and H64L variants similarly reconstituted with the chemically modified heme cofactors in order to elucidate the relationship between the Phe29 interaction and the distal H-bond that critically contributes to stabilization of Fe-bound O2. We found that the Phe29 interaction and distal H-bond act cooperatively to stabilize the Fe-bound O2 in such a manner that the Phe29 interaction strengthens with increasing strength of the distal H-bond. Comparison of the functional properties between the L29F and H64L variants indicated that the synergistic effect of the two interactions decreases the O2 dissociation and autoxidation rate constants of the protein by factors of ~1/2000 and ~1/400, respectively. Although the CO binding properties of the proteins were not greatly affected by the distal polar interactions, their synergistic effects were clearly and sharply manifested in the vibrational frequencies of the Fe-bound C–O stretching of the proteins.

Abstract Image

肌红蛋白远端极性相互作用的协同效应及其结构后果
在L29F型肌红蛋白(Mb)中,氧(O2)与血红素Fe原子的配位,除了Fe- O2与第64位残基(远端氢键)之间众所周知的氢键(h键)外,还受到fe29侧链苯基环多极与Fe- O2之间有利的静电相互作用(Phe29相互作用)的稳定。t.e.卡弗;布兰特利,r.e., Jr;e·w·辛格尔顿;Arduini, r.m.;奎林,m.l.;菲利普斯,g.n. Jr.;奥尔森,j.s.j.b ool。化学学报,1997,26(2):444 - 444。分析了一系列化学修饰血红素辅助因子重组的L29F/H64L和L29F/H64Q突变体的O2和CO (CO)结合特性和自氧化性,并与天然Mb以及化学修饰血红素辅助因子重组的L29F、H64Q和H64L突变体的O2和CO (CO)结合特性和自氧化性进行了比较,以阐明Phe29相互作用与对fe结合O2稳定起关键作用的远端氢键之间的关系。我们发现,Phe29相互作用和远端氢键协同作用,稳定了fe结合的O2,并且Phe29相互作用随着远端氢键强度的增加而增强。L29F和H64L的功能特性比较表明,两种相互作用的协同效应使蛋白的氧解离和自氧化速率常数分别降低了~1/2000和~1/400。尽管远端极性相互作用对蛋白质的CO结合性能影响不大,但它们的协同作用在蛋白质的铁结合C-O拉伸的振动频率上得到了清晰而明显的体现。
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来源期刊
Inorganic Chemistry
Inorganic Chemistry 化学-无机化学与核化学
CiteScore
7.60
自引率
13.00%
发文量
1960
审稿时长
1.9 months
期刊介绍: Inorganic Chemistry publishes fundamental studies in all phases of inorganic chemistry. Coverage includes experimental and theoretical reports on quantitative studies of structure and thermodynamics, kinetics, mechanisms of inorganic reactions, bioinorganic chemistry, and relevant aspects of organometallic chemistry, solid-state phenomena, and chemical bonding theory. Emphasis is placed on the synthesis, structure, thermodynamics, reactivity, spectroscopy, and bonding properties of significant new and known compounds.
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