Comprehensive Analysis of Cellular Senescence-Related Genes in Prognosis, Molecular Characterization and Immunotherapy of Hepatocellular Carcinoma.

IF 3.7 3区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Liang Sun, Zitao Liu, Ke Ning, Zhipeng Wu, Zhendong Chen, Zhengyi Wu, Xiangbao Yin
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Abstract

Background: Cellular senescence is a tumor suppressive response in which the cell cycle is in a state of permanent arrest and can inhibit tumor cell proliferation. In recent years, induction of cellular senescence has been shown to be important for antitumor therapy, and the link between cellular senescence and clinical prognosis and immunotherapy of hepatocellular carcinoma is still unknown.

Methods: We performed enrichment analysis of genes in three cellular senescence gene sets, screened for gene sets significantly enriched in hepatocellular carcinoma and extracted genes from them. Signature were constructed using senescence-related genes, and their expression was verified at the protein and RNA levels. Survival, clinical staging and grading, immune infiltration, immunotherapy, and drug sensitivity were also analyzed between risk groups.

Results: The q-PCR and immunohistochemistry results revealed significant differences in the expression of the signature genes between normal and tumor tissues. Significant differences in clinicopathological features, prognosis and immune infiltration were observed between risk groups. In the low-risk group, better OS and lower TMB scores were demonstrated, while the high-risk group had higher immune checkpoint expression, as well as lower risk of immune escape. In addition, we found that the High-risk group was more sensitive to sorafenib.

Conclusion: In summary, the signature constructed using aging-related genes can reliably predict patient prognosis and immunotherapy efficacy, providing a new idea for immune system therapy of hepatocellular carcinoma.

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细胞衰老相关基因在肝癌预后、分子表征及免疫治疗中的综合分析。
背景:细胞衰老是一种肿瘤抑制反应,细胞周期处于永久停滞状态,可以抑制肿瘤细胞的增殖。近年来,细胞衰老的诱导已被证明在抗肿瘤治疗中具有重要意义,但细胞衰老与肝细胞癌的临床预后和免疫治疗之间的联系尚不清楚。方法:对3组细胞衰老基因进行富集分析,筛选在肝癌中显著富集的基因,并从中提取基因。利用衰老相关基因构建标记,并在蛋白和RNA水平上验证其表达。分析两组患者的生存、临床分期和分级、免疫浸润、免疫治疗和药物敏感性。结果:q-PCR和免疫组化结果显示正常组织和肿瘤组织中特征基因的表达有显著差异。两组间临床病理特征、预后及免疫浸润均有显著差异。在低风险组中,OS更好,TMB评分更低,而高风险组免疫检查点表达更高,免疫逃逸风险更低。此外,我们发现高危组对索拉非尼更敏感。结论:综上所述,利用衰老相关基因构建的特征可以可靠地预测患者预后和免疫治疗效果,为肝癌的免疫系统治疗提供了新的思路。
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来源期刊
Biological Procedures Online
Biological Procedures Online 生物-生化研究方法
CiteScore
10.50
自引率
0.00%
发文量
16
审稿时长
>12 weeks
期刊介绍: iological Procedures Online publishes articles that improve access to techniques and methods in the medical and biological sciences. We are also interested in short but important research discoveries, such as new animal disease models. Topics of interest include, but are not limited to: Reports of new research techniques and applications of existing techniques Technical analyses of research techniques and published reports Validity analyses of research methods and approaches to judging the validity of research reports Application of common research methods Reviews of existing techniques Novel/important product information Biological Procedures Online places emphasis on multidisciplinary approaches that integrate methodologies from medicine, biology, chemistry, imaging, engineering, bioinformatics, computer science, and systems analysis.
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